• Protein editor
• Sequence comparison and naming
• Structure to sequence
• ChEMBL conversion
• Web API
• Multi-format calculator
• Back to Biochemfusion Home page

Examples

You can try some of these small well-known proteins.

• GLP-1 (7-36)
• Human Insulin
• Cyclosporin CsA (3-letter style input)

Or a rather big one (your browser will spend a little while drawing the 2D molecule).

• Myoferlin (234 kDa)

Proteax - multi-format calculator

This web page demonstrates Proteax^®'s automatic format detection and parsing capabilities. The page uses Adobe Flash to display sequences and structures so it can be used by browsers that do not support modern HTML5.

You can enter a protein in any recognized format (UniProt, GPMAW, PLN or FASTA) and have it transformed into any of the other formats without losing chemical information. One notable exception is of course the FASTA format which does not support any chemical annotations at all.

Along the way, Proteax will calculate chemical properties and produce sequence and structure renderings of the protein.

Protein text:
H-GIVEQC(1)C(2)TSIC(1)SLYQLENYC(3)N-OH.H-FVNQHLC(2)GSHLVEALYLVC(3)GERGFFYTPKT-OH
Transform to:

UniProt

GPMAW

PLN

FASTA

Transformed protein text
ID UNTITLED Unreviewed; 51 AA. FT CHAIN 1..21 FT A FT CHAIN 22..51 FT B FT DISULFID 6..11 FT DISULFID 7..28 FT DISULFID 20..40 SQ SEQUENCE 51 AA; 5796 MW; GIVEQCCTSI CSLYQLENYC NFVNQHLCGS HLVEALYLVC GERGFFYTPK T //

Sequence	Molecular weights	Da
	Average	5807.57022
	Standard UniProt	5795.64974

2D molecule

This page is for demonstration purposes only - to use Proteax on a regular basis you will need to obtain a license.

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