Proteax - protein comparison and naming

This web page demonstrates the use of DerNot expressions in Proteax®. DerNot expressions can be applied to existing proteins to create new protein derivatives or be calculated to express the difference between two protein entries (naming the derivative).

Query - a protein entry or a DerNot expression: (instructions)

Reference protein text:



Calculated DerNot expression DerNot expression applied
Reference protein Query protein (aligned to ref.)

1.33 milliseconds spent in Proteax code. 23.9 milliseconds spent processing HTML.

This page is for demonstration purposes only - to use Proteax on a regular basis you will need to obtain a license.

Instructions

The query field will accept either a protein entry in any recognized format (UniProt, GPMAW, PLN or FASTA) or a DerNot expression.

Regardless of what you enter in the query field Proteax will do a full round-trip calculation:

  • When you enter a protein entry in the query field the "Go" button will calculate the DerNot expression that describes the difference between the query protein and the reference protein.
  • The calculated DerNot expression will then be applied to the reference protein, resulting in a calculated derivative.
  • When a DerNot expression is entered in the query field the "Go" button will calculate a protein derivative by applying the DerNot expression to the reference protein entry.
  • The calculated derivative will then be compared with the reference protein and result in a calculated DerNot expression.